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Figure 5 | BMC Bioinformatics

Figure 5

From: FAAST: Flow-space Assisted Alignment Search Tool

Figure 5

Homopolymer deviation penalties. Illustrating homopolymer correction penalties as calculated in FAAST, for peak-value deviations ranging from -2.5 to 2.5 for homopolymers of length n = [1,8]. The maximum allowed flowpeak range, k = 0.25 (25%), as well as the minimum gap penalty of 7 (corresponds to the proportionality constant α = 28) was used for the calculation were the calculated penalty is rounded to the closest integer.

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