Table 3 A fragment of the output result from the miBLAST pipeline workflow, see Figure 5
From: Applications of the pipeline environment for visual informatics and genomics computations
BLASTN 2.2.8 [Jan-05-2004] | ||
|---|---|---|
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. | ||
Query=probe:HG-U133A:1007_s_at:467:181; Interrogation_Position=3330; Antisense; | ||
   (25 letters) | ||
Database:/ifs/ccb/CCB_SW_Tools/others/Bioinformatics/Blast/miBLAST/miblast/src/example/ecoli.nt | ||
   400 sequences; 4,662,239 total letters | ||
Searching.done | ||
Sequences producing significant alignments: | Score (bits) | E Value |
gi|1790777|gb|AE000503.1|AE000503 Escherichia coli K-12 MG1655 s... | 26 | 0.69 |
gi|2367246|gb|AE000436.1|AE000436 Escherichia coli K-12 MG1655 s... | 26 | 0.69 |
gi|1788338|gb|AE000294.1|AE000294 Escherichia coli K-12 MG1655 s... | 26 | 0.69 |
gi|1786819|gb|AE000166.1|AE000166 Escherichia coli K-12 MG1655 s... | 26 | 0.69 |
gi|1788310|gb|AE000292.1|AE000292 Escherichia coli K-12 MG1655 s... | 24 | 2.7 |