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Table 2 Detail of NoD predictions on the multi-organism testing dataset assembled

From: NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins

Organism Protein Accession Name Experimentally determined NoLS position NoD prediction Refa
Homo sapiens NP_001012333 Midkine 129-143 120-143 [19]
Homo sapiens NP_055701 NSA2 10-41 no NoLS [20]
Homo sapiens NP_055701 NSA2 131-154 133-155 [20]
Homo sapiens NP_872604 RASSF5 51-100 78-98 [21]
Homo sapiens NP_037541 follistatin 93-116 b 98-121 [22]
Homo sapiens CAA41051 histone H2B 28-35 15-42 [23]
Mus musculus NP_001012495 Cxcl12 98-118 92-119 [24]
Mus musculus NP_081208 NoBP 220-262 230-255 and 276-306 [25]
Mus musculus NP_082355 aminopeptidase O 688-725 682-712 [26]
Dictyostelium discoideum XP_002649205 eIF6 31-64 27-49 [27]
Dictyostelium discoideum XP_002649205 eIF6 246-252 295-320 [27]
Aplysia kurodai B0FRH7 ApLLP 1-19 1-21 [28]
Aplysia kurodai B0FRH7 ApLLP 90-120 96-120 [28]
Trypanosome brucei CAD21884 ESAG8 48-79 no NoLS [14]
Trypanosome cruzi XP_817097 Met-III 1-19 No NoLS [29]
Trypanosome cruzi XP_817097 Met-III 146-191 No NoLS [29]
Solanum lycopersicum Q944N1 LHP1 141-171 141-165 and 276-296 [30]
Arabidopsis thaliana NP_001078269 HMGB1 1-47 22-60 [31]
Bovine herpesvirus 1 CAA90914 BICP27 86-97 75-108 [32]
Human Adenovirus C YP_001551773 E4orf4 66-75 61-82 [33]
SARS P59633 Non-structural protein 3b 134-154 No NoLS [34]
HTLV-1 BAH85789 Tof 71-98 No NoLS [35]
Human herpes simplex P08353 Gamma-1 34.5 protein 1-16 1-22 [36]
Human adenovirus 2 P68950 protein VII 93-112 90-117 [15]
African Swine Fever Virus AAA87288 I14L 1-14 1-26 [37]
PRRSV (porcine) AAD00244 N protein 41-48 1-21 and 32-59 [38]
Tomato Leaf Curl Java Virus BAD90868 Capsid protein 1-30 no NoLS [39]
Potato leafroll virus P11624 Capsid protein 17-31 10-64 [40]
Marek's disease virus type 1 AAS01627 MEQ protein 62-78 22-47 and 52-81 [41]
Avian Infectious Bronchitis Virus CAC39307 N protein 71-78 347-377 [42]
Betanodavirus GGNNV NP_689432 Protein alpha 23-31 10-40 [43]
  1. a Ref: Reference reporting the experimental NoLS identification
  2. b In [22], the NoLS for follistatin is reported at positions 64-87. These correspond to the positions in the protein once the signal peptide has been removed.