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Table 1 Memory usage and Time for whole genome data

From: Efficient counting of k-mers in DNA sequences using a bloom filter

Program Time (hrs) Memory (GB)
BFCounter 23.82 42
Jellyfish 8.03 71
Naive* >26.38 >128
  1. Memory and time usage for the 1000 Genomes data set (40-fold coverage of individual NA19240). *The naive version ran out of memory after processing 84.7% of the reads.