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Table 1 11 representative proteins - number of residues and number of atoms

From: Implementation of 3D spatial indexing and compression in a large-scale molecular dynamics simulation database for rapid atomic contact detection

PDB4

Name

Residue Range

# residues

# protein atoms

2adr

Domain of Adr1 DBD from S. cerevisiae

102-130

29

496

1nr2

Thymus and activation-regulated chemokine

8-69

62

1011

1okt

Glutathione S-transferase

1-85

85

1412

2tgi

Domain of transforming growth factor-beta 2 (TGF- B2)

1-112

112

1750

1d0n

Horse plasma gelsolin

27-159

133

2095

1bp5

Domain of serum transferrin

82-246

165

2487

1hgu

Human growth hormone

2-190

189

3011

1p88

3-phosphoshikimate 1-carboxyvinyltransferase

25-240

216

3272

1fzw

Monomer of glucose-1-phosphate thymidylyltransferase

2-293

292

4560

1qaz

Alginate Lyase A1-III

4-354

351

5495

1ehe

Cytochrome P450nor

5-403

399

6217