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Table 2 REST: Obtaining protein information

From: PChopper: high throughput peptide prediction for MRM/SRM transition design

Description

Gets protein information that may be useful in distinguishing between similarly named biological entities. It is essentially a wrapper for the Phospho.ELM web service method.

HTTP-Method

GET

URL-Pattern

Application- Root >/protein/{protein}

Example URL

http://pchopper.lifesci.dundee.ac.uk/TmrcPortal/rest/properChopper/protein/akt

Example Results

< Substrates >

< Substrate >

< goTerms > nucleus</goTerms >

< interaction > 1433Z_HUMAN</interaction >

< interaction > TRAF2_HUMAN</interaction >

< interaction > 1433T_HUMAN</interaction >

< interaction > AKT1_HUMAN</interaction >

< interaction > PDPK1_HUMAN</interaction >

< interaction > RHEB_HUMAN</interaction >

< interaction > Q56VH8_HUMAN</interaction >

< interaction > 4EBP1_MOUSE</interaction >

< interaction > FRAP_HUMAN</interaction >

< interaction > EIF3F_MOUSE</interaction >

< name > mTOR</name >

</Substrate >

< Substrate >

< interaction > 1433S_HUMAN</interaction >

< name >

Rapamycin insensitive companion of mTOR

</name >

</Substrate >

</Substrates >