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Table 11 The results of the TC-PINs corresponding to various threshold values and the static PPI network.

From: A comparison of the functional modules identified from time course and static PPI network data

  #Periodic Genes #Modules Mp Mk f-measure
TC-PINs Threshold = 2.0 2589 1777 343 173 0.29
TC-PINs Threshold = 1.6 2786 1939 386 183 0.30
TC-PINs Threshold = 1.4 2893 1960 397 203 0.31
TC-PINs Threshold = 1.2 3001 2060 448 218 0.33
TC-PINs Threshold = 1.0 3108 2042 463 226 0.35
TC-PINs Threshold = 0.9 3167 2114 451 224 0.33
TC-PINs Threshold = 0.7 3273 2063 443 232 0.33
TC-PINs Threshold = 0.5 3377 1765 345 222 0.30
TC-PINs Threshold = 0.3 3487 1558 290 210 0.28
TC-PINs Threshold = 0.02 3552 980 177 194 0.26
Static PPI network   932 175 197 0.26
  1. The second column in Table 11 refers to the number of selected periodic genes over various threshold values. The third column shows the number of predicted modules which match at least a real complex. The fourth column indicates the number of the real complexes that match at least a predicted module. The last column is the f-measure values of the predicted modules.