TY - JOUR AU - Wilson, T. PY - 1995 DA - 1995// TI - Comments on the mechanisms of chemi- and bioluminescence JO - Photochem Photobiol VL - 62 UR - https://doi.org/10.1111/j.1751-1097.1995.tb08706.x DO - 10.1111/j.1751-1097.1995.tb08706.x ID - Wilson1995 ER - TY - BOOK AU - Hastings, J. W. PY - 1995 DA - 1995// TI - Bioluminescence PB - Academic Press CY - New York ID - Hastings1995 ER - TY - JOUR AU - Haddock, S. H. D. AU - Moline, M. A. AU - Case, J. F. PY - 2010 DA - 2010// TI - Bioluminescence in the Sea JO - Ann Rev Mar Sci VL - 2 UR - https://doi.org/10.1146/annurev-marine-120308-081028 DO - 10.1146/annurev-marine-120308-081028 ID - Haddock2010 ER - TY - BOOK AU - Lloyd, J. E. PY - 1978 DA - 1978// TI - Insect Bioluminescence PB - Academic Press CY - New York ID - Lloyd1978 ER - TY - JOUR AU - White, E. H. AU - Rapaport, E. AU - Seliger, H. H. AU - Hopkins, T. A. PY - 1971 DA - 1971// TI - The chemi- and bioluminescence of firefly luciferin: an efficient chemical production of electronically excited states JO - Bioorg Chem VL - 1 UR - https://doi.org/10.1016/0045-2068(71)90009-5 DO - 10.1016/0045-2068(71)90009-5 ID - White1971 ER - TY - JOUR AU - Wilson, T. AU - Hastings, J. W. PY - 1998 DA - 1998// TI - Bioluminescence JO - Annual Review of Cell and Developmental Biology VL - 14 UR - https://doi.org/10.1146/annurev.cellbio.14.1.197 DO - 10.1146/annurev.cellbio.14.1.197 ID - Wilson1998 ER - TY - JOUR AU - Cormier, M. J. AU - Lee, J. AU - Wampler, J. E. PY - 1975 DA - 1975// TI - Bioluminescence: Recent Advances JO - Annual Review of Biochemistry VL - 44 UR - https://doi.org/10.1146/annurev.bi.44.070175.001351 DO - 10.1146/annurev.bi.44.070175.001351 ID - Cormier1975 ER - TY - JOUR AU - Ward, W. W. AU - Swiatek, G. C. AU - Gonzalez, D. G. PY - 2000 DA - 2000// TI - Green fluorescent protein in biotechnology education JO - Methods Enzymol VL - 305 UR - https://doi.org/10.1016/S0076-6879(00)05518-X DO - 10.1016/S0076-6879(00)05518-X ID - Ward2000 ER - TY - JOUR AU - Chalfie, M. AU - Tu, Y. AU - Euskirchen, G. AU - Ward, W. W. AU - Prasher, D. C. PY - 1994 DA - 1994// TI - Green fluorescent protein as a marker for gene expression JO - Science VL - 263 UR - https://doi.org/10.1126/science.8303295 DO - 10.1126/science.8303295 ID - Chalfie1994 ER - TY - JOUR AU - Contag, C. H. AU - Bachmann, M. H. PY - 2002 DA - 2002// TI - Advances in in vivo bioluminescence imaging of gene expression JO - Annu Rev Biomed Eng VL - 4 UR - https://doi.org/10.1146/annurev.bioeng.4.111901.093336 DO - 10.1146/annurev.bioeng.4.111901.093336 ID - Contag2002 ER - TY - JOUR AU - Gonzalez, J. E. AU - Negulescu, P. A. PY - 1998 DA - 1998// TI - Intracellular detection assays for high-throughput screening JO - Curr Opin Biotechnol VL - 9 UR - https://doi.org/10.1016/S0958-1669(98)80141-9 DO - 10.1016/S0958-1669(98)80141-9 ID - Gonzalez1998 ER - TY - JOUR AU - Kain, S. R. PY - 1999 DA - 1999// TI - Green fluorescent protein (GFP): applications in cell-based assays for drug discovery JO - Drug Discov Today VL - 4 UR - https://doi.org/10.1016/S1359-6446(99)01330-6 DO - 10.1016/S1359-6446(99)01330-6 ID - Kain1999 ER - TY - JOUR AU - DiPilato, L. M. AU - Cheng, X. AU - Zhang, J. PY - 2004 DA - 2004// TI - Fluorescent indicators of cAMP and Epac activation reveal differential dynamics of cAMP signaling within discrete subcellular compartments JO - Proc Natl Acad Sci USA VL - 101 UR - https://doi.org/10.1073/pnas.0405973101 DO - 10.1073/pnas.0405973101 ID - DiPilato2004 ER - TY - JOUR AU - Hayes, M. J. AU - Merrifield, C. J. AU - Shao, D. AU - Ayala-Sanmartin, J. AU - Schorey, C. D. AU - Levine, T. P. AU - Proust, J. AU - Curran, J. AU - Bailly, M. AU - Moss, S. E. PY - 2004 DA - 2004// TI - Annexin 2 Binding to Phosphatidylinositol 4, 5-Bisphosphate on Endocytic Vesicles Is Regulated by the Stress Response Pathway JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M313025200 DO - 10.1074/jbc.M313025200 ID - Hayes2004 ER - TY - JOUR AU - Sanger, F. AU - Nicklen, S. AU - Coulson, A. R. PY - 1977 DA - 1977// TI - DNA sequencing with chain-terminating inhibitors JO - Proc Natl Acad Sci USA VL - 74 UR - https://doi.org/10.1073/pnas.74.12.5463 DO - 10.1073/pnas.74.12.5463 ID - Sanger1977 ER - TY - JOUR AU - Zhang, Z. H. AU - Wang, Z. H. AU - Zhang, Z. R. AU - Wang, Y. X. PY - 2006 DA - 2006// TI - A novel method for apoptosis protein subcellular localization prediction combining encoding based on grouped weight and support vector machine JO - FEBS Lett VL - 580 UR - https://doi.org/10.1016/j.febslet.2006.10.017 DO - 10.1016/j.febslet.2006.10.017 ID - Zhang2006 ER - TY - JOUR AU - Zhou, X. B. AU - Chen, C. AU - Li, Z. C. AU - Zou, X. Y. PY - 2007 DA - 2007// TI - Using Chou's amphiphilic pseudo- amino acid composition and support vector machine for prediction of enzyme subfamily classes JO - J Theor Biol VL - 248 UR - https://doi.org/10.1016/j.jtbi.2007.06.001 DO - 10.1016/j.jtbi.2007.06.001 ID - Zhou2007 ER - TY - STD TI - Brown MP, Grundy WN, Lin D, Cristianini N, Sugnet CW, Furey TS, Ares M Jr, Haussler D: Knowledge-based analysis of microarray gene expression data using SVM. Proceedings of the National Academy of Sciences 97(1):262–267. ID - ref18 ER - TY - JOUR AU - Altschul, S. F. AU - Madden, T. L. AU - Schaffer, A. A. AU - Zhang, J. AU - Zhang, Z. AU - Miller, W. AU - Lipman, D. J. PY - 1997 DA - 1997// TI - Gapped BLAST and PSI-BLAST: a new generation of protein database search programs JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.17.3389 DO - 10.1093/nar/25.17.3389 ID - Altschul1997 ER - TY - JOUR AU - Eddy, S. R. PY - 1998 DA - 1998// TI - Profile hidden Markov models JO - Bioinformatics VL - 14 UR - https://doi.org/10.1093/bioinformatics/14.9.755 DO - 10.1093/bioinformatics/14.9.755 ID - Eddy1998 ER - TY - JOUR AU - Sonnhammer, E. L. AU - Eddy, S. R. AU - Durbin, R. PY - 1997 DA - 1997// TI - Pfam: a comprehensive database of protein domain families based on seed alignments JO - Proteins VL - 28 UR - https://doi.org/3.0.CO;2-L DO - 3.0.CO;2-L ID - Sonnhammer1997 ER - TY - CHAP AU - Hunter, S. AU - Apweiler, R. AU - Attwood, T. K. AU - Bairoch, A. AU - Bateman, A. AU - Binns, D. AU - Bork, P. AU - Das, U. AU - Daugherty, L. AU - Duquenne, L. AU - Finn, R. D. AU - Gough, J. AU - Haft, D. AU - Hulo, N. AU - Kahn, D. AU - Kelly, E. AU - Laugraud, A. AU - Letunic, I. AU - Lonsdale, D. AU - Lopez, R. AU - Madera, M. AU - Maslen, J. AU - McAnulla, C. AU - McDowall, J. AU - Mistry, J. AU - Mitchell, A. AU - Mulder, N. AU - Natale, D. AU - Orengo, C. AU - Quinn, A. F. PY - 2009 DA - 2009// TI - InterPro: the integrative protein signature database BT - Nucleic Acids Res ID - Hunter2009 ER - TY - CHAP AU - Marchler-Bauer, A. AU - Lu, S. AU - Anderson, J. B. AU - Chitsaz, F. AU - Derbyshire, M. K. AU - DeWeese-Scott, C. AU - Fong, J. H. AU - Geer, L. Y. AU - Geer, R. C. AU - Gonzales, N. R. AU - Gwadz, M. AU - Hurwitz, D. I. AU - Jackson, J. D. AU - Ke, Z. AU - Lanczycki, C. J. AU - Lu, F. AU - Marchler, G. H. AU - Mullokandov, M. AU - Omelchenko, M. V. AU - Robertson, C. L. AU - Song, J. S. AU - Thanki, N. AU - Yamashita, R. A. AU - Zhang, D. AU - Zhang, N. AU - Zheng, C. AU - Bryant, S. H. PY - 2011 DA - 2011// TI - CDD: a Conserved Domain Database for the functional annotation of proteins BT - Nucleic Acids Res ID - Marchler-Bauer2011 ER - TY - JOUR AU - Kanehisa, M. AU - Goto, S. PY - 2000 DA - 2000// TI - KEGG: Kyoto encyclopedia of genes and genomes JO - Nucleic Acids Res VL - 28 UR - https://doi.org/10.1093/nar/28.1.27 DO - 10.1093/nar/28.1.27 ID - Kanehisa2000 ER - TY - CHAP AU - Quinlan, R. PY - 1993 DA - 1993// TI - C4.5 BT - Programs for Machine Learning PB - Morgan Kaufmann Publishers CY - San Mateo; CA ID - Quinlan1993 ER - TY - CHAP AU - Frank, E. AU - Witten, I. H. PY - 1998 DA - 1998// TI - Generating Accurate Rule Sets Without Global Optimization BT - Fifteenth International Conference on Machine Learning ID - Frank1998 ER - TY - JOUR AU - Breiman, L. PY - 2001 DA - 2001// TI - Random Forests JO - Machine Learning VL - 45 UR - https://doi.org/10.1023/A:1010933404324 DO - 10.1023/A:1010933404324 ID - Breiman2001 ER - TY - CHAP AU - Freund, Y. AU - Schapire, R. E. PY - 1996 DA - 1996// TI - Experiments with a new boosting algorithm BT - Thirteenth International Conference on Machine Learning, San Francisco ID - Freund1996 ER - TY - JOUR AU - Aha, D. AU - Kibler, D. PY - 1991 DA - 1991// TI - Instance-based learning algorithms JO - Machine Learning VL - 6 ID - Aha1991 ER - TY - JOUR AU - Li, W. AU - Jaroszewski, L. AU - Odzik, G. A. PY - 2001 DA - 2001// TI - Clustering of highly homologous sequences to reduce the size of large protein database JO - Bioinformatics VL - 17 UR - https://doi.org/10.1093/bioinformatics/17.3.282 DO - 10.1093/bioinformatics/17.3.282 ID - Li2001 ER - TY - JOUR AU - Kawashima, S. AU - Ogata, H. AU - Kanehisa, M. PY - 1999 DA - 1999// TI - AAindex: amino acid index database JO - Nucleic Acids Res VL - 27 UR - https://doi.org/10.1093/nar/27.1.368 DO - 10.1093/nar/27.1.368 ID - Kawashima1999 ER - TY - JOUR AU - Pugalenthi, G. AU - Kumar, K. K. AU - Suganthan, P. N. AU - Gangal, R. PY - 2008 DA - 2008// TI - Identification of catalytic residues from protein structure using support vector machine with sequence and structural features JO - Biochem Biophys Res Commun VL - 367 UR - https://doi.org/10.1016/j.bbrc.2008.01.038 DO - 10.1016/j.bbrc.2008.01.038 ID - Pugalenthi2008 ER - TY - JOUR AU - Cai, Y. D. AU - Pong-Wong, R. AU - Feng, K. AU - Jen, J. C. H. AU - Chou, K. C. PY - 2004 DA - 2004// TI - Application of SVM to predict membrane protein types JO - Journal of Theoretical Biology VL - 226 UR - https://doi.org/10.1016/j.jtbi.2003.08.015 DO - 10.1016/j.jtbi.2003.08.015 ID - Cai2004 ER - TY - JOUR AU - Cai, Y. D. AU - Liu, X. J. AU - Xu, X. B. AU - Chou, K. C. PY - 2002 DA - 2002// TI - Prediction of protein structural classes by support vector machines JO - Computers & Chemistry VL - 26 UR - https://doi.org/10.1016/S0097-8485(01)00113-9 DO - 10.1016/S0097-8485(01)00113-9 ID - Cai2002 ER - TY - BOOK AU - Vapnik, V. PY - 1998 DA - 1998// TI - Statistical Learning Theory PB - Wiley-Interscience CY - New York ID - Vapnik1998 ER - TY - JOUR AU - Muller, K. R. AU - Mika, S. AU - Ratsch, K. AU - Tsuda, K. AU - Scholkopf, B. PY - 2001 DA - 2001// TI - An introduction to kernel-based learning algorithms JO - IEEE Trans Neural Networks VL - 2 UR - https://doi.org/10.1109/72.914517 DO - 10.1109/72.914517 ID - Muller2001 ER - TY - CHAP AU - Chang, C. C. AU - Lin, C. J. PY - 2001 DA - 2001// BT - LIBSVM: A Library for Support Vector Machines ID - Chang2001 ER - TY - CHAP AU - Joachims, T. PY - 2002 DA - 2002// TI - Optimizing Search Engines Using Clickthrough Data BT - Proceedings of the ACM Conference on Knowledge Discovery and Data Mining (KDD), ACM ID - Joachims2002 ER - TY - JOUR AU - Haindl, M. AU - Somol, P. AU - Ververidis, D. AU - Kotropoulos, C. PY - 2006 DA - 2006// TI - Feature Selection Based on Mutual Correlation JO - Progress in Pattern Recognition, Image Anal Appl VL - 4225 UR - https://doi.org/10.1007/11892755_59 DO - 10.1007/11892755_59 ID - Haindl2006 ER - TY - JOUR AU - Zhang, Y. AU - Ding, C. AU - Li, T. PY - 2008 DA - 2008// TI - Gene selection algorithm by combining reliefF and mRMR JO - BMC Genomics VL - 9 UR - https://doi.org/10.1186/1471-2164-9-S2-S27 DO - 10.1186/1471-2164-9-S2-S27 ID - Zhang2008 ER - TY - JOUR AU - Peng, H. C. AU - Long, F. AU - Ding, C. PY - 2005 DA - 2005// TI - Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy JO - IEEE Transactions on Pattern Analysis and Machine Intelligence VL - 27 UR - https://doi.org/10.1109/TPAMI.2005.159 DO - 10.1109/TPAMI.2005.159 ID - Peng2005 ER -