From: Vertical decomposition with Genetic Algorithm for Multiple Sequence Alignment
Reference No. | Name of Dataset | Guide-tree | Decomp_2 | Decomp_3 | Decomp_4 | ||||
---|---|---|---|---|---|---|---|---|---|
 |  | WSPM | Correspon-ding BAliscore | WSPM | Correspond-ing BAliscore | WSPM | Correspond-ing BAliscore | WSPM | Correspond-ing BAliscore |
Ref. 2 | 1aboA | -1001.96 | 0.552 | -922.417 | 0.566 | -954.859 | 0.573 | -893.733 | 0.587 |
 | 1idy | 17.78 | 0.874 | 17.78 | 0.874 | 128.604 | 0.948 | 57.494 | 0.880 |
 | 1csy | -394.56 | 0.460 | -375.955 | 0.568 | -293.088 | 0.671 | -279.613 | 0.747 |
 | 1r69 | -153.23 | 0.716 | -122.574 | 0.750 | -112.983 | 0.780 | -109.973 | 0.723 |
 | 1tvxA | 118.32 | 0.916 | 118.322 | 0.936 | 118.322 | 0.936 | 127.866 | 0.941 |
 | 1tgxA | -141.68 | 0.798 | -28.893 | 0.801 | -26.709 | 0.815 | 54.808 | 0.809 |
 | 1ubi | -245.02 | 0.641 | -151.429 | 0.618 | -213.452 | 0.661 | -215.21 | 0.671 |
 | 1wit | -572.81 | 0.673 | -547.512 | 0.654 | -551.823 | 0.670 | -456.085 | 0.741 |
 | 2trx | 411.79 | 0.944 | 423.688 | 0.948 | 567.091 | 0.945 | 546.10 | 0.977 |
 | 1sbp | -226.99 | 0.710 | -226.99 | 0.710 | -200.282 | 0.733 | -163.487 | 0.710 |
 | 1havA | -666.52 | 0.783 | -499.625 | 0.787 | -552.664 | 0.787 | -470.297 | 0.793 |
 | 1uky | -368.69 | 0.651 | -227.468 | 0.634 | -320.261 | 0.629 | -213.937 | 0.710 |
 | 2hsdA | -1139.99 | 0.679 | -848.958 | 0.790 | -1020.644 | 0.729 | -1015.369 | 0.721 |
 | 2pia | -564.48 | 0.811 | -466.756 | 0.799 | -485.944 | 0.801 | -341.627 | 0.764 |
 | 3grs | -649.94 | 0.698 | -577.104 | 0.714 | -609.335 | 0.709 | -460.447 | 0.746 |
 | Kinase | -1112.18 | 0.763 | -973.132 | 0.741 | -845.541 | 0.771 | -924.093 | 0.747 |
 | 1ajsA | 1433.11 | 0.879 | 1481.384 | 0.901 | 1504.135 | 0.895 | 1502.130 | 0.881 |
 | 1cpt | -1406.04 | 0.732 | -1406.03 | 0.732 | -1392.476 | 0.725 | -1200.642 | 0.751 |
 | 1lvl | -2855.24 | 0.705 | -2855.241 | 0.705 | -2281.80 | 0.726 | -2687.77 | 0.749 |
 | 1pamA | -1895.88 | 0.699 | -1238.72 | 0.750 | -716.222 | 0.795 | -1311.726 | 0.720 |
 | 1ped | 1556.41 | 0.890 | 1556.407 | 0.902 | 1610.442 | 0.901 | 1612.574 | 0.907 |
 | 2myr | 664.52 | 0.734 | 753.00 | 0.757 | 775.25 | 0.751 | 760.204 | 0.754 |
 | 4enl | -42.30 | 0.802 | 12.135 | 0.812 | 116.309 | 0.822 | 66.895 | 0.824 |
Ref. 3 | 1idy | -1408.27 | 0.236 | -1378.605 | 0.303 | -1278.872 | 0.256 | -1274.323 | 0.447 |
 | 1r69 | -1735.897 | 0.541 | -1662.407 | 0.551 | -1735.897 | 0.562 | -1735.897 | 0.567 |
 | 1ubi | -1417.25 | 0.308 | -1381.00 | 0.264 | -1271.455 | 0.406 | -1396.996 | 0.321 |
 | 1wit | -1059.74 | 0.553 | -849.307 | 0.628 | -1015.695 | 0.644 | -806.003 | 0.676 |
 | 1uky | -5417.19 | 0.364 | -4981.878 | 0.387 | -5283.305 | 0.415 | -5417.186 | 0.364 |
 | kinase | -1112.18 | 0.736 | -973.132 | 0.741 | -845.541 | 0.771 | -924.093 | 0.747 |
 | 1ajsA | -4597.06 | 0.264 | -4597.06 | 0.264 | -4551.029 | 0.264 | -4597.06 | 0.264 |
 | 1pamA | -4217.03 | 0.680 | -3997.312 | 0.687 | -2981.082 | 0.746 | -4107.983 | 0.694 |
 | 1ped | -2296.46 | 0.574 | -1789.276 | 0.577 | -1512.652 | 0.682 | -1832.71 | 0.589 |
 | 2myr | -8545.30 | 0.318 | -8516.803 | 0.359 | -8163.882 | 0.355 | -7483.46 | 0.347 |
 | 4enl | -783.58 | 0.600 | -582.216 | 0.607 | -216.91 | 0.635 | -470.220 | 0.618 |