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Table 3 Performance of Decomposition techniques with Genetic Algorithm

From: Vertical decomposition with Genetic Algorithm for Multiple Sequence Alignment

   VDGA Without Decomposition VDGA Decomp_2 VDGA Decomp_3 VDGA Decomp_4
Reference No. Name of Dataset Best WSPM Ave. WSPM Corresponding BAliscore Best WSPM Ave. WSPM Corresponding BAliscore Best WSPM Ave. WSPM Corresponding BAliscore Best WSPM Ave. WSPM Corresponding BAliscore
Ref. 2 1aboA -377.456 -454.63 0.796 -301.74 -355.41 0.723 -234.25 -278.37 0.791 -334.12 -448.12 0.679
  1idy 408.98 380.81 0.989 489.85 480.74 0.981 516.31 498.62 0.992 430.70 303.702 0.992
  1csy -69.93 -101.09 0.764 -62.52 -66.29 0.731 -51.203 -59.42 0.885 -71.592 -86.019 0.831
  1r69 -28.937 -50.94 0.965 -1.453 -5.086 0.859 18.728 10.32 0.934 33.625 22.863 0.874
  1tvxA 334.38 315.46 0.920 364.01 321.49 0.944 387.32 384.51 0.974 384.79 286.39 0.944
  1tgxA 342.38 307.97 0.878 339.61 321.15 0.867 367.42 342.23 0.878 390.56 376.289 0.850
  1ubi 36.30 4.93 0.767 42.1 6.782 0.732 48.14 22.39 0.778 45.71 39.649 0.794
  1wit -120.21 -183.60 0.851 -108.91 -199.764 0.875 -102.45 -113.59 0.815 -115.34 -186.919 0.774
  2trx 903.23 855.29 0.986 929.39 905.042 0.959 957.92 945.45 0.986 944.13 921.391 0.986
  1sbp -19.79 -75.19 0.765 -12.58 -18.98 0.782 -34.26 45.66 0.772 -29.019 -34.766 0.778
  1havA 49.62 33.57 0.879 189.46 213.42 0.884 227.25 147.09 0.846 240.39 210.34 0.884
  1uky -84.92 -121.98 0.808 21.91 -9.297 0.845 69.57 42.91 0.891 -76.23 -106.861 0.872
  2hsdA -389.79 -443.99 0.796 -365.25 -426.28 0.856 -309.64 -355.36 0.829 -334.22 -391.32 0.742
  2pia -146.38 -223.91 0.826 -125.35 -143.025 0.847 -53.76 -75.84 0.850 -33.85 -48.513 0.839
  3grs -142.16 -210.66 0.746 -118.195 -142.41 0.717 -136.70 -164.49 0.751 -69.65 -131.917 0.781
  Kinase -191.16 -224.46 0.799 -129.92 -263.61 0.825 -180.11 -195.82 0.888 -145.51 -221.963 0.812
  1ajsA 1956.94 1920.89 0.899 1938.87 1918.284 0.906 2011.39 1958.0 0.905 1900.35 1827.312 0.902
  1cpt -435.69 -490.22 0.875 -402.59 -551.276 0.869 -325.41 -413.98 0.812 -410.893 -504.988 0.853
  1lvl -826.15 -916.93 0.781 -720.022 -884.03 0.803 -688.34 -810.04 0.819 -772.43 -1003.08 0.816
  1pamA -974.64 -1019.11 0.814 -986.278 -1040.69 0.857 -941.56 -1012.69 0.863 -939.83 -1045.98 0.853
  1ped 1940.82 1862.50 0.912 1911.36 18670.39 0.935 2003.19 1996.74 0.947 1998.13 1979.245 0.943
  2myr 13970.32 13865.22 0.822 13991.45 13292.104 0.806 14123.57 14115.91 0.830 14095.12 14042.641 0.808
  4enl 1386.81 1299.04 0.896 1161.56 1107.331 0.890 1329.23 1248.89 0.889 920.982 895.165 0.899
Ref. 3 1idy -512.34 -588.37 0.601 -588.25 -660.92 0.446 -496.91 -554.09 0.599 -482.98 -518.89 0.569
  1r69 -1103.34 -1174.5 0.709 -1099.76 -1181.71 0.724 -1081.08 -1124.14 0.733 -1056.54 -1083.03 0.765
  1ubi -959.62 -1004.26 0.386 -948.10 -1018.84 0.398 -871.85 -960.94 0.414 -916.78 -1005.13 0.410
  1wit -223.56 -263.99 0.758 -319.695 -332.971 0.833 -241.51 -309.58 0.873 -233.687 -273.302 0.867
  1uky -3565.98 -3662.99 0.468 -3412.58 -3595.6 0.469 -3181.7 -3308.02 0.481 -3287.773 -3328.27 0.526
  kinase -294.62 -357.70 0.828 -225.67 -276.98 0.870 -153.90 -213.56 0.890 -193.57 -248.795 0.887
  1ajsA -4199.49 -4250.98 0.311 -3375.033 -3467.24 0.383 -3136.73 -3463.15 0.453 -3339.93 -3439.16 0.408
  1pamA -2106.98 -2163.54 0.835 -1989.045 -2179.37 0.853 -1843.03 -2015.55 0.788 -1889.85 -1903.52 0.792
  1ped -1199.41 -1251.38 0.813 -683.44 -811.29 0.848 -411.75 -457.17 0.893 -721.65 -801.563 0.783
  2myr -6498.07 -6574.31 0.513 -6180.015 -6305.04 0.586 -5523.14 -5801.53 0.651 -5962.83 -6103.28 0.519
  4enl -45.86 -72.34 0.800 98.51 19.426 0.836 162.46 121.04 0.866 102.08 80.624 0.866