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Table 4 Predicted yeast gene regulatory relationships that are annotated in BIND

From: Quantitative utilization of prior biological knowledge in the Bayesian network modeling of gene expression data

BN with prior knowledge
HTA1HHT1 FUS1FAR1 FKH2CLB2 GAS1SWI4
SWI5FKH1 DPB3CDC45 DPB2DPB3 CLN2→CLN3
ASF1→HHF1 GAS1→KRE6 CLN3→CLB6 CDC14→SIC1
SWI4→MBP1 MSH6→POL30 CLB6→CLN1 SWI4→CHS3
KAR3→NUM1 HHF1→HHT1 MOB1→DBF2 RFA1→RFA3
CLB1→CLB3 CLN1→CLN3 CDC45→CDC6 CLB1→CLB5
HHF1→HTB2 HPR5→RAD54   
BN Without prior knowledge
HTA1HHT1 FUS1FAR1 FKH2CLB2 GAS1SWI4
SWI5FKH1 DPB3CDC45 DPB2DPB3 CLN3→CLN2
DBF4→CDC5 CDC8→CIK1 CDC6→CDC45 CLB3→CDC6
SIC1CDC14    
  1. Relationships in bold font are predicted both with and without prior knowledge.