Data set | BHC-SE | BHC-SE mixture model | Genes | Time points | Replicates |
---|
S. cerevisiae 1
| 6 m 3 s | 38 m 49 s | 169 | 17 | N/A |
S. cerevisiae 2
| 24 m 8 s | 5 h 48 m | 440 | 15 | 2 |
H. sapiens
| 19 s | 49 s | 58 | 10 | 44 |
E. coli
| 7 m 6 s | 34 m 39 s | 200 | 13 | 6 |
- Run times of data sets for BHC-SE and BHC-SE with a mixture model likelihood in hours (h), minutes (m) and seconds (s) on a 2.40 GHz Intel Xeon CPU. The run times for BHC-C were very similar to BHC-SE. Using replicate information did not increase the run times. Also shown are the number of genes, time points and replicates for each dataset.