From: Comparison of lists of genes based on functional profiles
Onto. | s | n | m | A and B gene lists | Testing procedure | Pr{rejectH0} (true H0) | Pr{rejectH0} (false H0) |
---|---|---|---|---|---|---|---|
Reference: [25] | |||||||
MF | 88 | 69 | 52 | A ∩ B = ∅ | Class-by-class | 0.0012 | 0.3903 |
Chi-square | 0.0334 | 1 | |||||
New global | 0.0469 | 1 | |||||
Additional signif. classes | 0.04585 | 0.697 | |||||
BP | 1602 | 372 | 328 | A ∩ B = ∅ | Class-by-class | 0.002 | 1 |
Chi-square | 0.162 | 1 | |||||
New global | 0.042 | 1 | |||||
Additional signif. classes | 0.042 | 0 | |||||
CC | 298 | 305 | 336 | A ∩ B = ∅ | Class-by-class | 0.0042 | 1 |
Chi-square | 0.0775 | 1 | |||||
New global | 0.0389 | 1 | |||||
Additional signif. classes | 0.0374 | 0 | |||||
MF | 88 | 110 | 99 | A ∩ B ≠ ∅ | Class-by-class | 0.0028 | 0.0729 |
k = 46 | Chi-square | 0.0341 | 0.998 | ||||
New global | 0.0428 | 0.7281 | |||||
Additional signif. classes | 0.0409 | 0.659 | |||||
BP | 1722 | 858 | 651 | A ∩ B ≠ ∅ | Class-by-class | 0.003 | 0.351 |
k = 318 | Chi-square | 0.152 | 1 | ||||
New global | 0.056 | 0.997 | |||||
Additional signif. classes | 0.055 | 0.646 | |||||
CC | 394 | 897 | 679 | A ∩ B ≠ ∅ | Class-by-class | 0.0076 | 0.9982 |
k = 354 | Chi-square | 0.0883 | 1 | ||||
New global | 0.0625 | 0.9999 | |||||
Additional signif. classes | 0.0599 | 0.0018 |