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Figure 4 | BMC Bioinformatics

Figure 4

From: Mitochondrial genome sequence analysis: A custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy

Figure 4

Residual sum of squares (RSS) plot for all 24 samples. Using the mean quality score across all samples for each probe as the baseline, the sum of squares of the difference between quality score for each sample and the baseline was determined. Samples #4, #14, #17, and #18 were outliers as had been shown by the generalized extreme studentized deviate (GSD) many-outlier procedure performed in Figure 2 [9].

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BMC Bioinformatics

ISSN: 1471-2105

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