Table 3 Top 20 k-mers ranked by different distances on motif sequences on STAT1 dataset
From: A motif-independent metric for DNA sequence specificity
| Â | STAT1 Motif | Â |
|---|---|---|
KL | Bhattacharyya | Hellinger |
aata | atat | aata |
ttaa | tata | ttaa |
aaat | aata | aaat |
aaaa | ttaa | aaaa |
ggaa | atta | ggaa |
atat | aaat | atat |
atac | taaa | atac |
tcaa | atac | tcaa |
aatt | aatt | aatt |
acat | ataa | acat |
taca | taca | taca |
aggg | cata | aggg |
cgga | aaaa | cgga |
atta | attg | atta |
attg | acat | attg |
taga | tcaa | taga |
caaa | agcg | caaa |
acta | gata | acta |
ccag | taga | ccag |
agca | cgga | agca |