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Figure 4 | BMC Bioinformatics

Figure 4

From: RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles

Figure 4

Read length range accuracy. Accuracy of RAIphy with short fragment lengths and genus-level prediction, compared with Phymm in the same spectrum. PhyloPythia operates accurately for >1000 bp fragments. Here, its poor performance for short-read range can be observed for 1 Kbp accuracy. Also, Carma searching Pfam domains and protein families for short reads, such as 100 bp fragments, appeared to be performing poorly in accordance with the results reported in [13].

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