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Table 1 Material of the MAQC project used in this study

From: Impact of the spotted microarray preprocessing method on fold-change compression and variance stability

Technology

Platform and Site

Sample A N Replicates

Sample B N Replicates

N Genes

Spotted oligo

GE Healthcare : Site 1

5

5

54 359

Spotted oligo

GE Healthcare : Site 3

5

5

54 359

Spotted cDNA

Eppendorf : Site 1

5

5

294

Spotted cDNA

Eppendorf : Site 3

5

5

294

Quantitative PCR

TaqMan

4

4

1 004