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Table 3 2 × 2 tables for literature search results of Q-FISH and SEQUEST

From: Enhanced peptide quantification using spectral count clustering and cluster abundance

  

Q-FISH

SEQUEST

  

HCC

Normal

Total

HCC

Normal

Total

Literature

Over-Expressed

25

17

42

34

26

60

 

Under-Expressed

6

17

23

9

24

33

 

Total

31

34

65

43

50

93

 

Accuracy

64.62%

 

62.37%

 
  1. We assume that if a peptide is reported in a previous literature, it is assumed to be correctly identified. We compared two results (Q-FISH and SEQUEST) through literature search. Based on this report, the following 2 × 2 tables can be constructed