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Table 3 Computation times for enumerating all tryptic compositions with different maximum lengths, with and without maximum mass limit

From: A parallel method for enumerating amino acid compositions and masses of all theoretical peptides

L Computation Time
  maxMass = 3 kDa no mass limit
25 19 min 29 min
30 11 min 1 h 20 min
35 8 min 5 h 38 min
40 8 min 38 h 28 min
45 14 min > 96 h
50 29 min -
  1. Parameters of the job table were: start ≤ 7, Lmax,2 = 20, Lmax,3 = 24, Lmax,4 = 28, Lmax,5 = 34, Lmax,6 = 40. Computations were done using 71 work processes executed on a cluster with 12 Intel Xeon X5650 CPUs running Windows HPC Server 2008.