From: Gene ontology based transfer learning for protein subcellular localization
Subcellular location | Size | MultiLoc | MultiLoc-GO | GO-TLM | |||||
---|---|---|---|---|---|---|---|---|---|
 |  |  | SP | SE | MCC | - | SP | SE | MCC |
Fungi (5407) | cytoplasm | 1411 | 0.68 | 0.85 | 0.70 | - | 0.9181 | 0.9773 | 0.9306 |
 | endoplasmic | 198 | 0.71 | 0.59 | 0.63 | - | 0.9611 | 0.8737 | 0.9136 |
 | extracellular | 843 | 0.73 | 0.81 | 0.73 | - | 0.9915 | 0.9656 | 0.9749 |
 | golgi | 150 | 0.71 | 0.53 | 0.60 | - | 0.9530 | 0.9467 | 0.9485 |
 | mitochondria | 510 | 0.88 | 0.82 | 0.83 | - | 0.9723 | 0.9647 | 0.9655 |
 | nucleus | 837 | 0.81 | 0.74 | 0.73 | - | 0.9754 | 0.9486 | 0.9558 |
 | peroxisome | 157 | 0.68 | 0.30 | 0.43 | - | 0.9735 | 0.9363 | 0.9535 |
 | plasmamembrane | 1238 | 0.76 | 0.89 | 0.78 | - | 0.9869 | 0.9774 | 0.9774 |
 | vacuole (Astrik) | 63 | 0.76 | 0.24 | 0.42 | - | 0.9355 | 0.9206 | 0.9273 |
Plant (5856) | chloroplast (Astrik) | 449 | 0.88 | 0.85 | 0.85 | - | 1.0000 | 0.9911 | 0.9952 |
 | Overall Accuracy | 74.60% | 89.60% | 96.65% | |||||
Animal (5547) | cytoplasm | 1411 | 0.67 | 0.85 | 0.68 | - | 0.9221 | 0.9809 | 0.9340 |
 | endoplasmic | 198 | 0.68 | 0.56 | 0.60 | - | 0.9667 | 0.8788 | 0.9189 |
 | extracellular | 843 | 0.79 | 0.83 | 0.77 | - | 0.9891 | 0.9692 | 0.9753 |
 | golgi | 150 | 0.71 | 0.43 | 0.53 | - | 0.9527 | 0.9400 | 0.9448 |
 | mitochondria | 510 | 0.88 | 0.82 | 0.83 | - | 0.9723 | 0.9627 | 0.9642 |
 | nucleus | 837 | 0.82 | 0.73 | 0.73 | - | 0.9826 | 0.9438 | 0.9566 |
 | peroxisome | 157 | 0.71 | 0.31 | 0.44 | - | 0.9799 | 0.9299 | 0.9533 |
 | plasmamembrane | 1238 | 0.73 | 0.90 | 0.76 | - | 0.9765 | 0.9750 | 0.9687 |
 | lysosome (Astrik) | 103 | 0.69 | 0.36 | 0.48 | - | 0.9592 | 0.9126 | 0.9344 |
 | Overall Accuracy | 74.60% | 89.60% | 96.27% |