Nprota | Accuracyb | Xdc |
|---|
| Â |
L/5
d
|
L/10
d
|
L/5
d
|
L/10
d
|
200-500
| 0.10 (0.09) | 0.11 (0.12) | 4.1 (4.2) | 4.6 (5.5) |
500-1000
| 0.16 (0.14) | 0.21 (0.18) | 6.3 (5.2) | 8.0 (6.9) |
1000-2000
| 0.24 (0.18) | 0.32 (0.24) | 9.3 (7.5) | 12.1 (9.3) |
2000-4000
| 0.25 (0.19) | 0.33 (0.26) | 8.8 (7.9) | 11.8 (10.1) |
- a Nprot, number of protein sequences in the alignment.
- bAccuracy, fraction of predicted contacts that is correct according to the crystal structure. Contacts are defined according to the CASP criteria (Cβ atoms (Cα for glycines) within a distance of 8 Å; only contacts for residues separated at least 24 residues along the sequence were taken into account).
- c Xd, measures how the distribution of distances for predicted contact pairs differs from the distribution of all pairs of residues in the target domain structure.
- d Highest ranked predicted contacts were assessed, using either L/5 or L/10 contacts. Here L refers to the length of the target sequence. Values for accuracy and Xd are averages (standard deviations).
