Table 2 Types of features which can be displayed for a single species and the specific resources used to create the OmniMap for Fusarium graminearum

Genome sequence

BROAD^♦

Gene space and gene orientation

BROAD

Intergenic space

BROAD

Gene annotation (1)

BROAD

Gene annotation (2)

MIPS^†

GC content

own analysis

Genetic map

[23]

Single nucleotide polymorphisms

BROAD

Transcriptomic analyses

PLEXdb^‡

Proteomics analyses

[47]

Gene function studies

www.PHI-base.org[48]

Exons & introns

BLAT

Signal proteins

SignalP

Transmembrane proteins & domains

TMHMM

GPI anchored proteins

Signal P + big-PI [49]

Domain annotation

PFAM, KOG, CDD

Homologous with other known proteins

BLASTP

Secretome

Signal P/WOLFPSORT