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Table 1 Comparison of entropy and expected values for several matrices

From: A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships

matrix entropy expected mean mismatch mean match
MOLLI60 0.7126 -0.5820 -1.56 6.10
BLOSUM62 0.6979 -0.5209 -1.42 5.80
BLOSUM45 0.3795 -0.2789 -1.34 7.05