Table 3 Annotator assignments per category
From: Semantic annotation of biological concepts interplaying microbial cellular responses
Annotator B | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
dna | rna | gene | protein | enzyme | transcription factor | compound | biochemical reaction | laboratory technique | physiological state | None | ||
Annotator A | dna | 8 (2316) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 58 (204) |
rna | 0 | 57 (9078) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 (64) | 23 (432) | |
gene | 0 | 0 | 1066 (16250) | 3 (68) | 0 | 0 | 3 (534) | 0 | 0 | 0 | 59 (276) | |
protein | 0 | 0 | 4 (564) | 55 (3396) | 5 (18) | 0 | 2 (64) | 0 | 0 | 0 | 53 (261) | |
enzyme | 0 | 0 | 0 | 3 (12) | 196 (5457) | 0 | 0 | 0 | 0 | 0 | 52 (219) | |
transcription factor | 0 | 1 (20) | 2 (6) | 7 (1510) | 0 | 9 (231) | 0 | 0 | 0 | 0 | 27 (431) | |
compound | 3 (170) | 0 | 1 (8) | 0 | 1 (68) | 0 | 369 (36857) | 0 | 0 | 0 | 75 (683) | |
biochemical reaction | 0 | 0 | 0 | 0 | 48 (1425) | 0 | 0 | 0 | 0 | 0 | 13 (48) | |
laboratory technique | 0 | 0 | 0 | 1 (18) | 1 (6) | 0 | 2 (183) | 0 | 136 (3495) | 1 (40) | 121 (852) | |
physiological state | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 97 (8361) | 210 (5397) | |
None | 44 (1555) | 52 (130) | 119 (529) | 73 (440) | 117 (941) | 9 (30) | 330 (2163) | 1 (1) | 187 (575) | 100 (786) | ||