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Table 4 Fit parameters for (FQPS) and (RQGS)

From: Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling

  

FQPS

corresponding RQGS

L Q

L S

λ

10 4 λ 2

K

λ

10 4 λ 2

K

P08100

50

   

0.3016 ± 0.40%

7.5741 ± 0.77%

0.0654 ± 3.34%

348

100

0.1747 ± 0.19%

3.2202 ± 0.32%

0.0132 ± 1.49%

0.2829 ± 0.17%

3.6884 ± 0.36%

0.0463 ± 4.09%

 

200

0.1617 ± 0.09%

1.7968 ± 0.18%

0.0100 ± 1.31%

0.2685 ± 0.15%

1.8498 ± 0.40%

0.0315 ± 2.77%

 

300

0.1478 ± 0.14%

1.3962 ± 0.21%

0.0059 ± 2.20%

0.2664 ± 0.14%

1.1900 ± 0.47%

0.0292 ± 3.49%

 

320

0.1466 ± 0.15%

1.3775 ± 0.28%

0.0056 ± 2.33%

0.2674 ± 0.11%

1.1059 ± 0.51%

0.0295 ± 2.05%

 

348

0.1432 ± 0.22%

1.4131 ± 0.33%

0.0051 ± 2.69%

0.2681 ± 0.10%

0.9909 ± 0.43%

0.0307 ± 2.18%

 

360

0.1426 ± 0.17%

1.4322 ± 0.22%

0.0047 ± 3.17%

0.2678 ± 0.10%

0.9883 ± 0.42%

0.0302 ± 2.49%

 

400

0.1418 ± 0.10%

1.4201 ± 0.17%

0.0047 ± 1.43%

0.2648 ± 0.12%

1.0238 ± 0.50%

0.0248 ± 3.89%

 

500

0.1399 ± 0.26%

1.4517 ± 0.35%

0.0043 ± 3.94%

0.2638 ± 0.17%

1.0248 ± 0.65%

0.0255 ± 5.65%

 

600

0.1405 ± 0.16%

1.4392 ± 0.20%

0.0047 ± 2.87%

0.2650 ± 0.14%

0.9917 ± 0.74%

0.0245 ± 3.85%

P50052

50

   

0.3024 ± 0.85%

7.4294 ± 1.70%

0.0657 ± 6.19%

363

100

0.1795 ± 0.16%

3.1869 ± 0.26%

0.0132 ± 1.42%

0.2818 ± 0.25%

3.6993 ± 0.55%

0.0458 ± 3.44%

 

200

0.1660 ± 0.18%

1.8701 ± 0.30%

0.0096 ± 1.98%

0.2698 ± 0.21%

1.8027 ± 0.58%

0.0341 ± 4.60%

 

300

0.1550 ± 0.22%

1.3995 ± 0.36%

0.0066 ± 2.97%

0.2643 ± 0.14%

1.2232 ± 0.42%

0.0273 ± 3.55%

 

330

0.1512 ± 0.12%

1.4130 ± 0.23%

0.0057 ± 1.30%

0.2654 ± 0.18%

1.0822 ± 0.68%

0.0274 ± 5.32%

 

363

0.1509 ± 0.18%

1.3881 ± 0.27%

0.0057 ± 3.53%

0.2687 ± 0.24%

0.9676 ± 1.00%

0.0332 ± 7.75%

 

380

0.1489 ± 0.12%

1.4138 ± 0.19%

0.0051 ± 1.17%

0.2651 ± 0.30%

0.9806 ± 1.28%

0.0270 ± 11.76%

 

400

0.1474 ± 0.20%

1.4335 ± 0.32%

0.0048 ± 3.27%

0.2634 ± 0.15%

0.9773 ± 0.75%

0.0271 ± 11.41%

 

500

0.1471 ± 0.08%

1.4350 ± 0.16%

0.0049 ± 1.13%

0.2613 ± 0.21%

0.9998 ± 1.05%

0.0226 ± 7.60%

 

600

0.1457 ± 0.28%

1.4640 ± 0.54%

0.0046 ± 3.24%

0.2662 ± 0.15%

0.9498 ± 0.79%

0.0250 ± 7.76%

Q18179

50

   

0.3008 ± 0.70%

7.6673 ± 1.23%

0.0625 ± 5.34%

455

100

0.1798 ± 0.33%

3.7190 ± 0.59%

0.0103 ± 2.84%

0.2845 ± 0.16%

3.5814 ± 0.35%

0.0485 ± 2.86%

 

200

0.1723 ± 0.16%

1.9839 ± 0.32%

0.0087 ± 1.50%

0.2685 ± 0.14%

1.8391 ± 0.49%

0.0302 ± 3.81%

 

300

0.1609 ± 0.25%

1.4302 ± 0.40%

0.0059 ± 4.49%

0.2632 ± 0.16%

1.2382 ± 0.53%

0.0262 ± 4.69%

 

420

0.1569 ± 0.27%

1.3665 ± 0.52%

0.0050 ± 2.90%

0.2636 ± 0.17%

0.8441 ± 0.59%

0.0222 ± 9.17%

 

450

0.1590 ± 0.25%

1.3225 ± 0.61%

0.0052 ± 2.86%

0.2611 ± 0.13%

0.8203 ± 0.43%

0.0209 ± 4.93%

 

455

0.1548 ± 0.26%

1.4038 ± 0.52%

0.0049 ± 2.76%

0.2655 ± 0.12%

0.7670 ± 0.49%

0.0246 ± 8.35%

 

480

0.1557 ± 0.38%

1.3664 ± 0.67%

0.0051 ± 7.10%

0.2610 ± 0.10%

0.7929 ± 0.41%

0.0197 ± 6.70%

 

500

0.1521 ± 0.45%

1.4145 ± 0.77%

0.0044 ± 5.30%

0.2615 ± 0.17%

0.7783 ± 0.62%

0.0204 5.09%

 

600

0.1540 ± 0.25%

1.3886 ± 0.43%

0.0043 ± 3.72%

0.2596 ± 0.14%

0.7706 ± 0.60%

0.0174 ± 5.71%

P35348

50

   

0.3046 ± 0.61%

7.3443 ± 1.17%

0.0668 ± 4.85%

466

100

0.1809 ± 0.18%

3.1996 ± 0.28%

0.0135 ± 2.06%

0.2839 ± 0.22%

3.6314 ± 0.49%

0.0465 ± 2.49%

 

200

0.1625 ± 0.12%

1.8687 ± 0.18%

0.0079 ± 1.63%

0.2696 ± 0.15%

1.8030 ± 0.48%

0.0315 ± 3.97%

 

300

0.1643 ± 0.10%

1.2089 ± 0.15%

0.0086 ± 2.23%

0.2620 ± 0.13%

1.2472 ± 0.47%

0.0241 ± 5.52%

 

400

0.1510 ± 0.24%

1.2641 ± 0.39%

0.0051 ± 2.76%

   
 

450

0.1521 ± 0.33%

1.2357 ± 0.55%

0.0050 ± 5.39%

0.2647 ± 0.16%

0.7874 ± 0.67%

0.0246 ± 3.93%

 

466

0.1485 ± 0.17%

1.2982 ± 0.35%

0.0046 ± 2.93%

   
 

480

0.1517 ± 0.23%

1.2359 ± 0.34%

0.0056 ± 5.27%

0.2609 ± 0.25%

0.7981 ± 1.25%

0.0207 ± 9.36%

 

500

0.1492 ± 0.22%

1.2845 ± 0.35%

0.0048 ± 3.64%

0.2668 ± 0.09%

0.7124 ± 0.49%

0.0265 ± 6.00%

 

600

0.1509 ± 0.28%

1.2383 ± 0.40%

0.0050 ± 3.86%

   
  1. Fit parameters λ, λ2 and K of the modified Gumbel distribution for (FQPS) and (RQGS).