Table 3 Average runtimes, memory requirements, and log likelihood scores (over 10 runs) for the 56 K dataset
From: Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees
55593 taxa | |||
|---|---|---|---|
R = 0.25 | R = 0.5 | R = 1 | |
Runtime (h) | 50.17 | 63.22 | 85.89 |
Memory for Backbone (GB) | 8.22 | 12.72 | N/A |
Memory for Full tree (GB) | 16.82 | 16.82 | 16.82 |
LogLikelihood | -7063342 | -7061516 | -7060488 |
LogLikelihood (Std Dev) | 1727.90 | 1761.27 | 1718.47 |
Avg (logLH - logLH(R = 1)) | 2853.41 | 1028.04 | 0.0 |