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Table 6 Total SP scores of the tools which use the structural information on BAliBASE 3.0 subsets, SABmark data sets and OXBENCH data sets.

From: MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts

MSA tools RV11 RV12 RV20 RV30 RV40 RV50 Whole BAliBASE SABmark OXBENCH
MSACompro 73.14 94.84 93.30 87.16 92.11 91.41 88.85 68.85 92.60
MUMMALS 66.94 94.30 91.04 84.79 87.15 87.91 85.53 62.12 90.25
PROMALS 79.08 93.55 93.31 88.30 89.80 90.27 89.00 77.40 93.76
PROMALS3D 83.58 92.33 93.62 89.42 90.93 89.73 90.14 88.89 97.37
  1. Bold denotes the highest scores.