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Table 1 Test set based on CASP targets.

From: A quality metric for homology modeling: the H-factor

Test case (CASP ID)

Template(s) (resolution (Ã…))

%sequence identity between template and target

Coverage

Type of sequence alignment

Loop segments of 3 or more residues

T0295

1ZQ9 (1.90)

46

1-275

(100%)

pairwise

80-86; 163-166; 179-

182; 225-228; 271-275

T0375

2DCN (2.25); 1RKD (1.84); 1V1A (2.10);

1VM7 (2.15); 2AFB (2.05); 2FV7 (2.10)

17

1-296

(100%)

multiple

33-37; 75-78; 100-103

T0287

1V55 (1.90)

16

1-199

(100%)

pairwise

33-37; 75-78; 100-103;

166-170; 197-199