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Figure 1 | BMC Bioinformatics

Figure 1

From: GC-Content Normalization for RNA-Seq Data

Figure 1

Yeast dataset: Read count vs. GC-content. Lowess fits of gene-level log(count + 1) vs. GC-content for the eight YPD lanes from the Yeast dataset, after FQ between-lane normalization. Curves are colored according to culture/library preparation. The GC-content effect is the same for lanes assaying the same culture/library preparation, but can be different for lanes assaying different cultures/library preparations. Figure S4 displays the scatterplot and lowess fit for the first YPD lane (culture/library preparation Y1, flow-cell 428R1).

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