Skip to main content

Table 1 Results when our novel strategy is applied to a real short read dataset

From: A new strategy for better genome assembly from very short reads

Measurements
Assemblies
Total length Average length Contig number (> 1 kbp) Longest length
Velvet 3,912,568 15,840 247 162,643
ABySS 4,099,096 35,035 117 243,520
SOAPdenovo 3,919,811 13,851 283 154,821
DBG 3,927,655 18,974 207 241,821
Reliable A-contigs 3,754,796 3,516 1068(> 0.5 kbp) 39,380
Hybrid assembly 4,304,581 45,793 94 241,821