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Table 2 Variables of the model

From: An Agent-Based Model to study the epidemiological and evolutionary dynamics of Influenza viruses

Name

Class

Type

Description

currentPathogens

BIRD

PATHOGEN[]

Array with every strains in Infectious state

next Pathogens

BIRD

PATHOGEN[]

Array with every strains just enter in Infectious state

oldPathogens

BIRD

PATHOGEN[]

Array with infection history

Pathogens

LAKE

PATHOGEN[]

Array containing every strains present in the environment

ViralLoad

LAKE

INTEGER[]

Viral load of every stains present in the lake

identity

PATHOGEN

double

Strain identity

hostTab

MODEL

HOST[]

Array with all "Host" objects

  1. Every of these attributes change dynamically through time and represent the environment, the host population and its infectious status