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Table 6 Genotype counts and p-values of SNPs rs1005316 and rs2876711 for type 2 diabetes mellitus

From: Robust joint analysis allowing for model uncertainty in two-stage genetic association studies

SNP ID

 

r0

r1

r2

s0

s1

s2

ALLEJ

CATAJ

MERTJ

MAX3J

rs1005316

Stage 1

13

224

457

44

211

399

6.13 × 10-5

7.78 × 10-6

3.87 × 10-6

8.12 × 10-7

 

Stage 2

89

669

1708

89

913

1856

    

rs2876711

Stage 1

99

322

272

121

351

182

2.92 × 10-7

2.07 × 10-8

5.97 × 10-8

3.10 × 10-8

 

Stage 2

389

1191

989

484

1404

987

    
  1. Note: r0, r1, and r2 denote the number of individuals carrying genotype gg, Gg, and GG in case sample, respectively; s0, s1, and s2 denote the number of individuals carrying genotype gg, Gg, and GG in control sample, respectively.
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BMC Bioinformatics

ISSN: 1471-2105

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