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Table 3 Details of muscle disease dataset.

From: Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies

Disease

Number of samples

Case study

Series ID

Platform

Description

LGMD2A

10

L/S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2A (calpainopathy)

nLGMD2A

10

L/S

GSE11681

HGU133A

MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2A (calpainopathy)

LGMD2B

10

L/S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2B (Dysferlinopathy, Miyoshi distal myopathy)

LGMD2I

7

L/S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2I

BMD

5

S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, BECKER TYPE

DMD

10

S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, PSEUDOHYPERTROPHIC PROGRESSIVE, DUCHENNE TYPE

FSHD

14

S

GSE3307

HGU133A

MUSCULAR DYSTROPHY, FACIOSCAPULOHUMERAL

AQM

5

S

GSE3307

HGU133A

ACUTE QUADRIPLEGIC MYOPATHY

SPG4

4

S

GSE3307

HGU133A

SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT

ALS

9

S

GSE3307

HGU133A

AMYOTROPHIC LATERAL SCLEROSIS 1

X_EDMD

4

S

GSE3307

HGU133A

EMERY-DREIFUSS MUSCULAR DYSTROPHY, 1 (X-linked)

AD_EDMD

4

S

GSE3307

HGU133A

EMERY-DREIFUSS MUSCULAR DYSTROPHY, AUTOSOMAL DOMINANT

AbNORM

11

L/S

GSE3307

HGU133A

NORMAL

Ctrl

10

L/S

GSE11681

HGU133A

NORMAL

  1. General information about muscular disease meta-dataset. S: Skeletal Muscular disease dataset; L: LGMD analysis.