Table 2 Average cumulative success rate from percentile 1 to 50 using the simulated datasets (400 and 800 samples). The best algorithm with the highest average cumulative success rate in each dataset is shown in bold.
From: Gene-gene interaction filtering with ensemble of filters
Methods | Heritability = 0.05 | Heritability = 0.1 | Heritability = 0.2 | Heritability = 0.3 |
|---|---|---|---|---|
Simulated dataset with 400 samples | ||||
χ2-test | 6.92 | 7.20 | 8.06 | 8.51 |
Odds Ratio | 5.86 | 7.84 | 8.43 | 8.58 |
ReliefF | 18.96±0.38 | 20.93±0.47 | 30.35±0.28 | 33.98±0.31 |
ReliefF-E | 19.27±0.17 | 21.22±0.14 | 30.92±0.24 | 34.76±0.26 |
TuRF | 22.11±1.34 | 24.59±2.53 | 42.27±3.41 | 61.37±1.58 |
SURFTuRF | 18.12 | 21.88 | 44.92 | 59.88 |
TuRF-E | 35.23±0.37 | 35.85±0.82 | 63.55±0.93 | 84.71±0.25 |
Simulated dataset with 800 samples | ||||
χ2-test | 7.73 | 8.53 | 9.61 | 7.84 |
Odds Ratio | 8.53 | 9.86 | 9.92 | 6.61 |
ReliefF | 24.37±0.52 | 25.11±0.80 | 44.23±0.86 | 54.40±0.75 |
ReliefF-E | 25.59±0.63 | 25.85±0.28 | 44.81±0.36 | 56.91±0.46 |
TuRF | 33.20±2.11 | 39.99±2.04 | 78.64±3.14 | 91.93±1.13 |
SURFTuRF | 41.20 | 50.82 | 96.27 | 99.86 |
TuRF-E | 61.59±0.58 | 65.75±1.09 | 96.69±0.26 | 99.96±0.21 |