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Table 2 List of supported ID types in GARNET

From: GARNET – gene set analysis with exploration of annotation relations

Category

ID Type

Examples

Gene ID

Entrez Gene

1457, 2002, 1950

 

Ensembl Gene

ENSG00000101266

 

Ensembl Transcript

ENST00000361797

 

GenBank Accession

AB451279, AI628974

 

GenBank ID

19769225, 4665774

 

RefSeq

NM_130786, NM_000014

 

UniGene

Hs.41, Hs.56

 

HGNC Gene Symbol

A1BG, A1CF, A2LD1

 

HGNC Gene ID

7, 8, 7645

Protein ID

UniProtKB Accession

P62258, Q04917

 

UniProtKB ID

1433B_HUMAN

 

PIR Accession

S34755, A61235, I38947

Microarray

Affymetrix probe ID

212073_at, 210984_x_at

 

Illumina probe ID

4210086, 2510484