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Table 1 Physicochemical properties of an active site group

From: A study on the flexibility of enzyme active sites

Property

Description

Size

number of residues

#align

number of matched residues in the alignment

%align

ratio of residues successfully matched in the alignment (%)

RMSD

root mean square deviation of the matched residues (Ã…)

Charge

sum of the electrostatic preference of all residues

Polarity

sum of the polar preference of all residues

ASA

sum of accessible surface area of all residues (Ã…2)