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Table 3 Performance evaluation on LocExtR

From: PicXAA-R: Efficient structural alignment of multiple RNA sequences using a greedy approach

Method k20 k40 k60 k80 TIME
  SPS/SCI SPS/SCI SPS/SCI SPS/SCI  
PicXAA-R 71.46 / 17.43 77.52 / 16.08 80.19 / 11.00 82.51 / 10.73 999
ProbConsRNA 64.97 / 10.13 69.08 / 8.12 72.11 / 5.80 74.46 / 6.87 676
MXSCARNA 65.52 / 9.67 68.30 / 8.44 69.45 / 9.15 71.16 / 8.93 662
CentroidAlign 71.68 / 18.63 74.48 / 15.56 77.55 / 11.90 79.32 / 10.07 1359
MAFFT-xinsi 77.02 / 26.30 80.48 / 20.84 81.96 / 16.70 83.52 / 14.00 3791