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Table 3 Gene Ontology distribution incorrectly annotated across evidence codes and the related factors

From: GOChase-II: correcting semantic inconsistencies from Gene Ontology-based annotations for gene products

Evidence code No. of inaccurate annotation (correlation coefficient value) Total No. of GO annotation
  Redundant annotation Biological domain inconsistent annotation Taxonomy inconsistent annotation Total inaccurate annotation  
NR 0 (*) 0 (*) 0 (*) 0 (*) 6
ISM 30 (-0.07) 2 (0.26) 0 (*) 32 (-0.06) 279
ISA 287 (-0.05) 1,385 (0.40) 0 (*) 1,672 (-0.04) 11,756
IGC 322 (-0.05) 11 (0.43) 0 (*) 333 (-0.04) 888
IC 1,193 (-0.03) 1,265 (0.40) 0 (*) 2,458 (-0.02) 12,490
IEP 2,344 (-0.03) 2,467 (0.46) 0 (*) 4,811 (-0.02) 27,889
EXP 3,273 (0.08) 1,221 (0.16) 0 (*) 4,494 (0.08) 20,781
IGI 3,628 (-0.02) 4,171 (0.41) 0 (*) 7,799 (-0.02) 34,985
RCA 6,469 (-0.07) 7,710 (0.18) 0 (*) 14,179 (-0.06) 85,014
NAS 7,921 (0.01) 4,285 (0.39) 0 (*) 12,206 (0.02) 58,687
IPI 10,555 (0.11) 1,163 (0.31) 0 (*) 11,718 (0.11) 72,597
ISO 14,119 (-0.05) 15,956 (0.39) 16 (-0.06) 30,091 (-0.04) 115,268
TAS 15,944 (0.01) 8,331 (0.39) 5 (-0.01) 24,280 (0.01) 113,414
ND 18,987 (-0.07) 1 (0.51) 0 (*) 18,988 (-0.05) 366,152
ISS 24,314 (0.01) 12,828 (0.53) 49 (0.01) 37,191 (0.03) 377,770
IMP 25,994 (-0.03) 29,932 (0.38) 160 (-0.06) 56,086 (-0.03) 242,825
IDA 44,327 (0.01) 29,863 (0.38) 17 (-0.02) 74,207 (0.01) 311,481
IEA 11,433,355 (0.99) 219,560 (0.75) 56,180 (0.99) 11,709,095 (0.99) 42,984,075
NA (Not Avaliable) 803 (-0.02) 3,654 (0.61) 12 (-0.04) 4,469 (-0.01) 18,102
No of gene product (0.71) (0.97) (0.69) (0.72)  
No. of species (0.99) (0.78) (0.99) (0.99)  
No. of GO term (0.35) (0.57) (0.34) (0.36)  
Average No. of annotations (0.99) (0.76) (0.99) (0.99)