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Table 1 Network data sets

From: Resolving the structure of interactomes with hierarchical agglomerative clustering

Name V E Kind Organism Source
Arabidopsis 777 1,831 4.71 Physical A. Thaliana BioGRID1
Celegans 1,089 2,842 5.22 Physical C. elegans BioGRID1
Drosophila 4,692 19,876 8.47 Physical D. melanogaster BioGRID1
Human 6,094 26,112 8.57 Physical H. sapiens BioGRID1
Yeast-PPI 5,105 50,542 19.80 Physical S. cerevisiae BioGRID1
Yeast-GEN 4,763 85,855 36.05 Genetic S. cerevisiae BioGRID1,2
SGA 4,398 108,369 49.38 Genetic S. cerevisiae Costanzo et al.3
dSLAM 627 4,710 15.02 Genetic S. cerevisiae Pan et al.4
  1. Symbols: V, number of vertices (genes/proteins); E, number of edges (interactions); , average degree. Data sources: (1) BioGRID 2.0.61 [22]; (2) We selectively included “Negative Genetic”, “Synthetic Growth Defect”, “Synthetic Haploinsufficiency”, “Synthetic Lethality” experiments; (3) Supp. Data S4, intermediate cutoff, of Costanzo et al. [23]; (4) Supp. Table S1 of Pan et al. [24].