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Table 10 The m=8 features selected from the eight clusters identified from DNAaset that one best feature is selected from one cluster by IGA.

From: Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties

Feature ID

AAindex ID

Description

P159

LEVM760107

van der Waals parameter epsilon (Levitt, 1976)

H87

FAUJ880110

Number of full nonbonding orbitals (Fauchere et al., 1988)

A99

GEIM800103

Alpha-helix indices for beta-proteins (Geisow-Roberts, 1980)

C197

NAKH900109

AA composition of membrane proteins (Nakashima et al., 1990)

P63

DAWD720101

Size (Dawson, 1972)

H11

BIOV880102

Information value for accessibility; average fraction 23% (Biou et al., 1988)

H396

YUTK870104

Activation Gibbs energy of unfolding, pH9.0 (Yutani et al., 1987)

H451

NADH010106

Hydropathy scale based on self-information values in the two-state model (36% accessibility) (Naderi-Manesh et al., 2001)