Feature ID | AAindex ID | Description |
---|---|---|
53 | CHOP780216 | Normalized frequency of the 2nd and 3rd residues in turn (Chou-Fasman, 1978b) |
56 | CIDH920103 | Normalized hydrophobicity scales for alpha+beta-proteins (Cid et al., 1992) |
64 | DAYM780101 | Amino acid composition (Dayhoff et al., 1978a) |
86 | FAUJ880109 | Number of hydrogen bond donors (Fauchere et al., 1988) |
91 | FINA770101 | Helix-coil equilibrium constant (Finkelstein-Ptitsyn, 1977) |
188 | NAGK730103 | Normalized frequency of coil (Nagano, 1973) |
202 | NAKH920101 | AA composition of CYT of single-spanning proteins (Nakashima-Nishikawa, 1992) |
227 | PALJ810105 | Normalized frequency of turn from LG (Palau et al., 1981) |
228 | PALJ810106 | Normalized frequency of turn from CF (Palau et al., 1981) |
255 | PRAM900104 | Relative frequency in reverse-turn (Prabhakaran, 1990) |
262 | QIAN880105 | Weights for alpha-helix at the window position of -2 (Qian-Sejnowski, 1988) |
274 | QIAN880117 | Weights for beta-sheet at the window position of -3 (Qian-Sejnowski, 1988) |
286 | QIAN880129 | Weights for coil at the window position of -4 (Qian-Sejnowski, 1988) |
363 | SUEM840101 | Zimm-Bragg parameter s at 20 C (Sueki et al., 1984) |
383 | WEBA780101 | RF value in high salt chromatography (Weber-Lacey, 1978) |
388 | WOEC730101 | Polar requirement (Woese, 1973) |
412 | AURR980110 | Normalized positional residue frequency at helix termini N5 (Aurora-Rose, 1998) |
430 | MUNV940102 | Free energy in alpha-helical region (Munoz-Serrano, 1994) |
434 | WIMW960101 | Free energies of transfer of AcWl-X-LL peptides from bilayer interface to water (Wimley-White, 1996) |
443 | KUMS000104 | Distribution of amino acid residues in the alpha-helices in mesophilic proteins (Kumar et al., 2000) |
486 | BASU050102 | Interactivity scale obtained by maximizing the mean of correlation coefficient over single-domain globular proteins (Bastolla et al., 2005) |
513 | JACR890101 | Weights from the IFH scale (Jacobs-White, 1989) |