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Table 2 Effects of epigenetic patterns in reduced regression models

From: A regression analysis of gene expression in ES cells reveals two gene classes that are significantly different in epigenetic patterns

Model Peaks 11 TFs 11TFs + 3 epigenetic effects Simulation
   CV-R CV-R2 Variables CV-R CV-R2 Variables CV-R2
Exponential Chen_Eland 0.53 0.282 9 0.58 0.333 12 0.283
  FP4_Eland 0.57 0.319 10 0.59 0.351 12 0.318
  FP4_Bowtie 0.58 0.331 8 0.60 0.356 10 0.330
  FP4_MAQ 0.58 0.335 9 0.60 0.361 12 0.334
  FP4_Soap2 0.58 0.333 9 0.60 0.357 11 0.331
Density Chen Eland 0.53 0.281 10 0.58 0.334 12 0.282
  FP4_Eland 0.57 0.324 10 0.60 0.358 12 0.325
  FP4_Bowtie 0.59 0.342 9 0.61 0.366 10 0.340
  FP4_MAQ 0.59 0.346 9 0.61 0.370 10 0.345
  FP4_Soap2 0.59 0.344 9 0.61 0.366 12 0.342