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Table 2 Algorithm average performance comparisons (100 trials of 50% HOCV)

From: Multi-resolution independent component analysis for high-performance tumor classification and biomarker discovery

Dataset

Avg. classification rate ±std (%)

Avg. sensitivity ± std (%)

Avg. specificity ± std (%)

Stroma

   

mica-svm

98.26±02.25

100.0±00.00

93.89±08.11

svm

73.83±07.02

92.87±06.58

25.45±15.92

pca-svm

71.83±06.78

90.20±08.66

25.62±16.48

ica-svm

71.48±06.78

90.04±09.05

25.06±17.87

nmf-svm

68.39±08.67

86.30±11.93

23.69±11.93

pca-lda

71.35±06.97

89.12±09.15

26.69±17.05

Breast_1

   

mica-svm

99.04±00.99

99.49±01.18

97.73±02.95

svm

86.40±02.87

92.43±02.76

68.78±11.53

pca-svm

86.19±02.97

92.79±02.68

66.85±11.77

ica-svm

86.27±02.99

92.80±02.82

67.11±12.37

nmf-svm

85.44±02.42

93.52±02.91

61.29±09.10

pca-lda

86.25±02.89

92.43±02.83

68.15±11.95

Prostate

   

mica-svm

99.69±00.67

99.88±00.64

99.44±01.38

svm

91.16±02.58

89.53±04.53

93.42±04.57

pca-svm

90.76±02.65

89.18±04.60

92.94±04.76

ica-svm

61.43±08.54

78.75±23.15

41.09±28.88

nmf-svm

71.03± 07.27

88.48±07.17

49.84±19.33

pca-lda

90.47±03.46

89.46±04.81

91.87±05.76

Glioma

   

mica-svm

98.76±02.03

98.89±02.90

98.82±02.89

svm

74.00±07.51

68.19±12.71

79.45±11.30

pca-svm

72.60±06.81

69.05±14.38

76.25±11.69

ica-svm

47.20±08.79

25.24±29.21

69.61±29.55

nmf-svm

74.40±08.04

74.53±11.10

74.19±13.53

pca-lda

73.96±07.02

68.38±12.41

79.18±12.39

HCC

   

mica-svm

98.30±02.30

99.23±02.02

96.97±06.05

svm

61.53±07.75

75.04±12.40

37.15±18.27

pca-svm

60.93±07.90

72.82±14.19

39.53±17.70

ica-svm

58.73±07.29

72.37±12.51

29.72±15.93

nmf-svm

61.30±08.91

71.17±13.47

43.47±16.67

pca-lda

61.07±07.58

74.15±12.40

37.15±17.08

Breast_2

   

mica-svm

97.23±03.20

97.79±03.90

96.93±05.17

svm

63.04±05.48

65.81±11.20

61.59±13.17

pca-svm

62.29±05.54

66.86±12.09

59.00±13.72

ica-svm

62.27±05.59

67.39±11.51

58.28±13.81

nmf-svm

62.77±06.60

66.92±10.68

59.57±13.69

pca-lda

62.54±05.48

66.94±11.90

59.39±13.25