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Table 3 Algorithm average performance comparisons (10-fold CV)

From: Multi-resolution independent component analysis for high-performance tumor classification and biomarker discovery

Dataset

Avg. classification rate ± std (%)

Avg. sensitivity ± std (%)

Avg. specificity ± std (%)

Stroma

   

mica-svm

98.00 ± 06.32

100.0 ± 00.00

95.00 ± 15.81

pca-lda

71.83 ± 11.15

94.17 ± 12.45

15.00 ± 33.75

svm

74.83 ± 19.76

90.83 ± 14.93

35.00 ± 47.43

pca-svm

71.00 ± 16.47

91.67 ± 18.00

15.00 ± 33.75

Breast_1

   

mica-svm

99.52 ± 01.51

100.0 ± 00.00

98.00 ± 06.32

pca-lda

88.51 ± 06.10

90.88 ± 07.60

81.00 ± 15.56

svm

87.49 ± 06.85

91.91 ± 08.37

75.00 ± 22.62

pca-svm

88.00 ± 04.99

91.47 ± 05.81

77.00 ± 15.27

Prostate

   

mica-svm

100.0 ± 00.00

100.0 ± 00.00

100.0 ± 00.00

pca-lda

93.29 ± 05.50

90.71 ± 08.74

96.67 ± 07.03

svm

94.12 ± 05.84

92.32 ± 06.63

96.33 ± 07.77

pca-svm

93.35 ± 05.48

92.32 ± 08.87

95.00 ± 08.05

Glioma

   

mica-svm

100.0 ± 00.00

100.0 ± 00.00

100.0 ± 00.00

pca-lda

76.33 ± 18.93

68.33 ± 36.39

81.67 ± 19.95

svm

75.67 ± 19.82

66.67 ± 33.33

81.67 ± 19.95

pca-svm

78.00 ± 17.98

68.33 ± 27.72

86.67 ± 17.21

HCC

   

mica-svm

100.0 ± 00.00

100.0 ± 00.00

100.0 ± 00.00

pca-lda

68.33 ± 14.59

80.00 ± 15.81

45.00 ± 43.78

svm

71.67 ± 15.81

82.50 ± 16.87

50.00 ± 33.33

pca-svm

63.33 ± 17.21

77.50 ± 14.19

35.00 ± 33.75

Breast_2

   

mica-svm

99.00 ± 03.16

100.0 ± 00.00

98.00 ± 06.32

pca-lda

62.77 ± 20.39

59.33 ± 19.74

66.50 ± 28.87

svm

67.61 ± 17.41

66.33 ± 25.26

69.00 ± 29.89

pca-svm

62.94 ± 13.09

60.67 ± 23.19

65.00 ± 22.36