From: Ontology-based instance data validation for high-quality curated biological pathways
 | Biological event | Freq. | Warnings | Reasons (freq.) |
---|---|---|---|---|
1 | ME_Autocleavage | 2 | 2 | # of input (2) |
 | ME Binding | 1898 | 253 | TYPE (169), # of inputprocess (4), no inputprocess (80) |
 | ME_DNABinding | 29 | 0 | (0) |
 | ME_DNAReplication | 6 | 0 | (0) |
 | ME_Dissociation | 37 | 3 | TYPE (3) |
 | ME_GDP-GTPExchange | 4 | 0 | (0) |
 | ME_Isomerization | 1 | 0 | (0) |
 | ME_MetabolicReaction | 40 | 7 | TYPE (7) |
 | ME_ProteasomeDegradation | 34 | 0 | (0) |
 | ME_ProteinCleavage | 5 | 0 | (0) |
 | ME_UnknownDegradation | 45 | 1 | TYPE (1) |
2 | ME_Acetylation | 3 | 7 | (0) |
 | ME ADPRibosylation | 2 | 7 | # of input (1) |
 | ME_Amidation | 1 | 1 | no output (1) |
 | ME_Glycosylation | 1 | 3 | (0) |
 | ME_Nitrosylation | 2 | 6 | # of inputprocess (1) |
 | ME Oxidation | 12 | 28 | (0) |
 | ME Phosphorylation | 448 | 967 | no inputprocess(1), no output (1) |
 | ME_Reduction | 1 | 3 | (0) |
 | ME_Sumoylation | 2 | 4 | (0) |
 | ME_Ubiquitination | 67 | 166 | (0) |
 | ME UnknownActivation | 793 | 1415 | # of inputprocess (11), no inputprocess (3) |
 | ME_UnknownInactivation | 6 | 16 | (0) |
 | ME_Autophosphorylation | 12 | 36 | # of input (2) |
 | ME_Dephosphorylation | 9 | 19 | (0) |
 | ME_Deubiquitination | 4 | 11 | (0) |
3 | ME_Dimerization | 49 | 50 | STOICHIOMETRY (49), |
 |  |  |  | # of inputprocess (1) |
 | ME_Oligomerization | 7 | 7 | STOICHIOMETRY (7) |
 | ME Polymerization | 5 | 5 | STOICHIOMETRY (5) |
4 | ME Internalization | 9 | 22 | CELLCOMPONENT (10) |
 | ME_NuclearExport | 4 | 3 | CELLCOMPONENT (3) |
 | ME Translocation | 136 | 275 | # of output (6), no inputprocess (2) |
 |  |  |  | CELLCOMPONENT (87) |
5 | ME_GeneExpression | 721 | 262 | CELLCOMPONENT (259), TYPE (3) |
 | ME_IonTransportThroughIonChannel | 2 | 4 | TYPE (2) |
 | ME Transcription | 13 | 7 | CELLCOMPONENT (4), TYPE (3) |
 | ME Translation | 364 | 393 | # of input (1), TYPE (7),CELLCOMPONENT(385) |
n/a | no rules for 8 biological events | 136 | - | - |
 | Total | 4910 | 3983 | 1121 |