Table 2 Technologies used in the SDDM process.
From: Scenario driven data modelling: a method for integrating diverse sources of data and data streams
| Technology name | Download site | Description |
|---|---|---|
| ActiveMQ | http://activemq.apache.org/ | Used to connect each of the following BioSITES software components: Detectors, Sensors, Routers, and Controllers. |
| Rexter | https://github.com/tinkerpop/rexster/wiki/ | Rexter exposes RDF over REST. |
| JAXB | http://jaxb.java.net/ | Parses the contents of the XML-metadata into java objects, place the content of these objects into a message, contact the broker, and forward a message to downstream routers. |
| Neo4J | http://neo4j.org/download/ | Used to import the ProMED mail archive for easy searching. |
| OrientDB | http://www.orientechnologies.com/orient-db.htm | A NoSQL DBMS which can store 150000 documents per second on common hardware |
| DEX | http://www.sparsity-technologies.com/dex.php | A high-performance graph database written in Java and C++ that allows the integration of multiple data sources |
| Jena’s TDB | http://www.openjena.org/TDB/ | TDB is a component of Jena. It provides for large scale storage and query of RDF datasets using a pure Java engine |
| Jena | http://www.openjena.org/ | An API for the manipulation of RDF data. |
| Sesame | http://www.openrdf.org/ | An API for the manipulation of RDF |
| AllegroGraph | http://clos.org/agraph/downloads/ | A system to load, store and query RDF data. |
| Virtuoso | http://virtuoso.openlinksw.com/dataspace/dav/wiki/Main/VOSDownload | Virtuoso is an innovative enterprise grade multi-model data server for agile enterprises & individuals. |
| Gremlin | https://github.com/tinkerpop/gremlin/wiki | Gremlin is a graph traversal language |
| Protege | http://protege.stanford.edu/ | A free open-source Java tool providing an extensible architecture for the creation of customized knowledge-based applications |
| Tomcat | http://tomcat.apache.org/ | Apache Tomcat is an open source software implementation of the Java Servlet and JavaServer Pages technologies. |
| SPARQL | http://www.w3.org/TR/rdf-sparql-query/ | A relational like query interface to SQL Data |