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Table 2 Technologies used in the SDDM process.

From: Scenario driven data modelling: a method for integrating diverse sources of data and data streams

Technology name Download site Description
ActiveMQ http://activemq.apache.org/ Used to connect each of the following BioSITES software components: Detectors, Sensors, Routers, and Controllers.
Rexter https://github.com/tinkerpop/rexster/wiki/ Rexter exposes RDF over REST.
JAXB http://jaxb.java.net/ Parses the contents of the XML-metadata into java objects, place the content of these objects into a message, contact the broker, and forward a message to downstream routers.
Neo4J http://neo4j.org/download/ Used to import the ProMED mail archive for easy searching.
OrientDB http://www.orientechnologies.com/orient-db.htm A NoSQL DBMS which can store 150000 documents per second on common hardware
DEX http://www.sparsity-technologies.com/dex.php A high-performance graph database written in Java and C++ that allows the integration of multiple data sources
Jena’s TDB http://www.openjena.org/TDB/ TDB is a component of Jena. It provides for large scale storage and query of RDF datasets using a pure Java engine
Jena http://www.openjena.org/ An API for the manipulation of RDF data.
Sesame http://www.openrdf.org/ An API for the manipulation of RDF
AllegroGraph http://clos.org/agraph/downloads/ A system to load, store and query RDF data.
Virtuoso http://virtuoso.openlinksw.com/dataspace/dav/wiki/Main/VOSDownload Virtuoso is an innovative enterprise grade multi-model data server for agile enterprises & individuals.
Gremlin https://github.com/tinkerpop/gremlin/wiki Gremlin is a graph traversal language
Protege http://protege.stanford.edu/ A free open-source Java tool providing an extensible architecture for the creation of customized knowledge-based applications
Tomcat http://tomcat.apache.org/ Apache Tomcat is an open source software implementation of the Java Servlet and JavaServer Pages technologies.
SPARQL http://www.w3.org/TR/rdf-sparql-query/ A relational like query interface to SQL Data