Table 5 Top 25 ranked TFs for five microarray derived gene sets using the abstract cooccurrence model.
abstract co-occurrrence model | |||||
|---|---|---|---|---|---|
Rank | Interferon | IL-4 | Tunicamycin | GH | TGF-β1 |
1 | Irf1 | Hif1a | Ddit3 | Nfkb1 | Hif1a |
2 | Stat1 | Sfpi1 | Egr1 | Stat1 | Egr1 |
3 | Irf9 | Tcfap2a | Gfi1 | Cebpb | Runx2 |
4 | Stat6 | Irf1 | Ppara | Rel | Smad3 |
5 | Stat4 | Rela | Ppard | Foxp3 | Sp1 |
6 | Nr3c1 | Egr1 | Tcfap2a | Kitl | Smad4 |
7 | Irf3 | Pparg | Tcf3 | Nfatc2 | Smad1 |
8 | Sfpi1 | Nfkb1 | Rara | Rela | Tcf3 |
9 | Myc | Stat1 | Zbtb16 | Irf1 | Nkx2-5 |
10 | Jund | Ikzf1 | Rarg | Stat6 | Tcf4 |
11 | Atf3 | Foxo1 | Cebpd | Jun | Elk3 |
12 | Ifi47 | Gata1 | Hoxa9 | Sfpi1 | Tcfap2a |
13 | Prdm1 | Itgal | Rxra | Cebpd | Tcf12 |
14 | Stat3 | Kitl | Hsf1 | Ddit3 | Smad7 |
15 | Foxn1 | Foxn1 | Nr5a1 | Foxn1 | Zbtb16 |
16 | Ep300 | Fosl1 | Pparg | Irf3 | Bcl6 |
17 | Usf1 | Stat6 | Otx1 | Ep300 | Pgr |
18 | Irf8 | Stat3 | Ep300 | Vdr | Cebpd |
19 | Bcl6 | Fos | Jund | Cebpa | Ep300 |
20 | Rxrb | Jun | Srebf1 | Fos | Smad2 |
21 | Hsf1 | Nfatc2 | Hand1 | E2f1 | Jun |
22 | Rela | Foxp3 | Hif1a | Sp1 | Foxo3 |
23 | Junb | Sp1 | Egr2 | Ppara | Pax5 |
24 | Fos | Foxo3 | Runx2 | Myb | Ppara |
25 | Stat2 | Pxn | Gata3 | Pax5 | Myod1 |