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Table 5 Performance Comparison for the Selected Categorical Attributes in Biological Activity Data of Glycogen Synthase Kinase-3β Inhibitors Using Two-degree Polynomial Kernel and Gaussian Kernels.

From: Leveraging domain information to restructure biological prediction

  Entropy list order Training CV Accuracy(%) Test Accuracy(%)
  Poly Gausssian Poly Gausssian (γ) Poly Gausssian (γ)
   0.01 1 10   0.01 1 10   0.01 1 10
Baseline 76.23 73.10 62.74 59.42 74.26 70.69 60.58 57.44
nCIR 3 2 1 1 78.84 75.41 64.48 60.15 74.55 71.23 61.26 58.02
F06[N-O] 2 1 2 2 77.62 73.23 63.34 60.23 73.28 70.49 60.87 56.95
H-049 4 5 4 4 79.75 74.69 65.18 61.03 75.14 71.87 62.76 57.26
nN 1 6 6 7 79.24 74.87 64.77 60.49 75.23 71.04 62.38 57.15
F04[N-N] 7 3 5 6 78.32 74.14 63.14 60.63 74.16 70.02 61.79 57.69
Bioassay Protocol 8 7 3 5 79.15 75.54 65.15 62.25 76.03 72.87 63.76 59.34
nHDon 11 19 18 19 77.63 74.18 63.05 60.02 75.12 71.17 60.34 57.28
H-050 21 7 7 9 76.95 73.57 63.72 60.35 74.34 71.09 59.28 56.94
nDB 13 24 21 25 75.37 73.89 62.83 59.25 73.22 70.18 60.47 56.74
F07[C-Br] 17 12 15 16 77.25 74.58 63.04 60.42 73.96 71.65 61.07 58.15
F02[N-O] 25 16 13 15 76.14 73.87 62.95 58.72 72.87 70.66 60.84 57.35
N-075 20 17 17 21 78.06 74.92 63.74 60.87 75.64 71.29 62.88 59.04
F06[C-Br] 27 26 25 23 75.44 72.05 61.43 58.28 72.76 69.96 60.03 55.74
F02[N-N] 33 30 26 32 77.83 74.15 63.82 60.96 74.56 70.75 61.44 59.45
N-074 29 35 33 34 76.54 73.47 63.95 60.42 74.75 71.03 60.58 57.96
F03[N-N] 36 31 34 37 75.69 74.26 62.65 59.35 73.48 70.33 59.87 57.28