Table 1 Gene names and Region names based on the GenInfo Identifiers (GIs) of the top 20 unannotated protein pairs that are aligned in the top conserved paths. Synonymous gene names are shown within parentheses.
From: Enhancing the accuracy of HMM-based conserved pathway prediction using global correspondence scores
E. coli | S. typhimurium | ||||
|---|---|---|---|---|---|
GI | Gene name | Region name | GI | Gene name | Region name |
16131641 | wzzE | Wzz | 16767194 | wzzE | Wzz |
49176398 | viaA (yieM) | VWA_YIEM_type | 39546380 | yieM | VWA_YIEM_type |
16131399 | yhjJ | PqqL | 16766899 | yhjJ | PqqL |
16131130 | aaeB (yhcP) | FUSC | 16766659 | yhcP | FUSC |
16130240 | yfcl | Transposase_3 1 | 16767050 | STM3766 | Transposase_31 |
49176226 | bamC (nlpB) | Lipoprotein_l8 | 16765808 | nlpB | Lipoprotein_l8 |
16129342 | ydbH | DctA-YdbH | 16764990 | ydbH | DctA-YdbH |
49176233 | sseB | SseB | 16765855 | sseB | SseB |
16129572 | ydgA | PRK11367 | 16764812 | ydgA | PRK11367 |
16131557 | yidR | propeller_TolB | 16767096 | yidR | TolB |
16131404 | bcsB (yhjN) | BcsB | 16766904 | yhjN | BcsB |
16130950 | ygiF | CYTH-like_Pase_CHAD | 16766502 | ygiF | CYTH-like_Pase_CHAD |
16131855 | yjbH | DUF94O | 16767475 | yjbH | DUF940 |
16128005 | yaaW (htgA) | Ubiq_cyt_C_chap | 16763400 | htgA | Ubiq_cyt_C_chap |
16130391 | ypfG | DUF1176 | 16765796 | ypfG | DUF1176 |
16130357 | yfeY | DUF1131 | 16765767 | STM2447 | DUF1131 |
49176330 | yhdP | PRK10899 | 16766664 | yhdP | PRK10899 |
16131526 | yicH | AsmA | 16767033 | yicH | AsmA |
16131275 | yrfF | IgaA | 16766783 | yrfF | IgaA |
16129282 | ycjx | DUF463 | 16765028 | ycjx | DUF463 |