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Table 2 Selection of genes given by the methods: QDA interaction detector procedure, TSP and CorScor

From: A new method for identifying bivariate differential expression in high dimensional microarray data using quadratic discriminant analysis

QDA interaction detector procedure

TSP selection

CorScor selection

(H72234, D29641)

TSP = 0.11 CorScor = 0.73

(T68848, H29170)

TSP = 0.92 CorScor = 0.77

(H23544, R88740)

TSP = 0.92 CorScor = 1.18

(R88740, H05899)

TSP = 0.84 CorScor = 1.05

(R88740, H23544)

TSP = 0.92 CorScor = 1.18

(D42047, H23544)

TSP = 0.81 CorScor = 1.14

(T68848, H48072)

TSP = 0.89 CorScor = 0.81

 

(H11084, X68277)

TSP = 0.81 CorScor = 1.10

(D45887, H11084)

TSP = 0.76 CorScor = 0.80

 

(T57468, D42047)

TSP = 0.84 CorScor = 1.09

Gene IDs

Gene descriptions

H72234

DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE (HUMAN)

D29641

Human mRNA (KIAA0052) for ORF, partial cds

R88740

ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR (HUMAN)

H05899

HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2 (HUMAN)

T68848

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (HUMAN)

H48072

CYTOCHROME C OXIDASE POLYPEPTIDE VIA-LIVER (HUMAN)

D45887

Human mRNA for calmodulin, complete cds

H11084

VASCULAR ENDOTHELIAL GROWTH FACTOR (Cavia porcellus)

H29170

ATP SYNTHASE B CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN)

H23544

GTP-BINDING NUCLEAR PROTEIN RAN (Homo sapiens)

D42047

Human mRNA (KIAA0089) for ORF (mouse glycerophosphate dehydrogenase-related), partial cds

X68277

H.sapiens CL 100 mRNA for protein tyrosine phosphatase

T57468

FIBRILLARIN (HUMAN)